Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 RPL12P7-201ENST00000493832 494 ntBASIC7.43□□□□□ -1.22
RB1P06400 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 AC087752.2-201ENST00000521219 281 ntBASIC7.43□□□□□ -1.22
RB1P06400 AC007537.1-201ENST00000539347 327 ntBASIC7.43□□□□□ -1.22
RB1P06400 TDGP1-201ENST00000543961 1229 ntBASIC7.43□□□□□ -1.22
RB1P06400 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 AC007066.2-202ENST00000566531 914 ntBASIC7.43□□□□□ -1.22
RB1P06400 AC025283.1-201ENST00000572039 734 ntBASIC7.43□□□□□ -1.22
RB1P06400 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RB1P06400 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RB1P06400 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 AC137695.2-201ENST00000603123 754 ntBASIC7.43□□□□□ -1.22
RB1P06400 AC012368.3-201ENST00000604190 219 ntBASIC7.43□□□□□ -1.22
RB1P06400 AC104184.1-201ENST00000607513 721 ntBASIC7.43□□□□□ -1.22
RB1P06400 AC097641.3-201ENST00000613523 464 ntBASIC7.43□□□□□ -1.22
RB1P06400 AP005212.3-201ENST00000619964 528 ntBASIC7.43□□□□□ -1.22
RB1P06400 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RB1P06400 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.43□□□□□ -1.22
RB1P06400 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RB1P06400 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RB1P06400 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 RPS10P21-201ENST00000430654 475 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.42□□□□□ -1.22
RB1P06400 SDHCP3-201ENST00000445371 506 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC026336.1-201ENST00000466577 351 ntBASIC7.42□□□□□ -1.22
RB1P06400 AP000805.1-201ENST00000471604 784 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC099340.1-201ENST00000475247 599 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC106822.1-201ENST00000502647 526 ntBASIC7.42□□□□□ -1.22
RB1P06400 MAST4-IT1-201ENST00000514241 658 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 AP005597.2-201ENST00000526238 341 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC005363.1-201ENST00000530779 351 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.42□□□□□ -1.22
RB1P06400 RPL29P33-201ENST00000587474 316 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 AL139041.1-201ENST00000605480 610 ntBASIC7.42□□□□□ -1.22
RB1P06400 AC139795.3-201ENST00000606358 541 ntBASIC7.42□□□□□ -1.22
RB1P06400 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 AC099667.1-201ENST00000624222 469 ntBASIC7.42□□□□□ -1.22
RB1P06400 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.42□□□□□ -1.22
RB1P06400 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RB1P06400 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.42□□□□□ -1.22
RB1P06400 TNFSF15-201ENST00000374044 2789 ntBASIC7.42□□□□□ -1.22
RB1P06400 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.42□□□□□ -1.22
RB1P06400 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RB1P06400 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
RB1P06400 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RB1P06400 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
RB1P06400 AL162171.3-201ENST00000617439 3178 ntBASIC7.41□□□□□ -1.22
RB1P06400 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RB1P06400 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms