Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCN2BO60939 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCN2BO60939 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCN2BO60939 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN2BO60939 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN2BO60939 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN2BO60939 LCOR-201ENST00000286067 4542 ntBASIC6.54□□□□□ -1.36
SCN2BO60939 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN2BO60939 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN2BO60939 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN2BO60939 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN2BO60939 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN2BO60939 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN2BO60939 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 AC005034.3-201ENST00000604845 1747 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
SCN2BO60939 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 SALL4P7-201ENST00000555779 3120 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN2BO60939 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SCN2BO60939 SNORA70.5-201ENST00000365519 135 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 AL713922.1-201ENST00000416477 747 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN2BO60939 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN2BO60939 RBMY2JP-201ENST00000425544 1059 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 AF274573.1-201ENST00000430535 494 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 SETP4-201ENST00000455717 868 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 AP000662.1-201ENST00000530952 487 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN2BO60939 AL035410.2-201ENST00000604963 864 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 AL136139.1-201ENST00000605568 222 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 AC007406.5-201ENST00000570140 3170 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN2BO60939 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 FO082842.1-201ENST00000423552 1370 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 AC090774.4-201ENST00000578888 1372 ntBASIC6.53□□□□□ -1.36
SCN2BO60939 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN2BO60939 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN2BO60939 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN2BO60939 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SCN2BO60939 AC119674.1-204ENST00000641348 1343 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
SCN2BO60939 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 ABCA11P-202ENST00000504019 2110 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 FAUP2-201ENST00000394301 401 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 NIP7P1-201ENST00000433227 512 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 BX005266.3-201ENST00000443013 1075 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 MYL6P4-201ENST00000477911 453 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 AC018475.1-201ENST00000478358 465 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 RN7SL379P-201ENST00000479912 293 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 NACAP6-201ENST00000509572 622 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 OR51A1P-201ENST00000511110 946 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 OR4A13P-201ENST00000529316 942 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 AC092375.1-201ENST00000550410 637 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.52□□□□□ -1.37
SCN2BO60939 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 MIR4258-201ENST00000580920 91 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 AC091768.1-201ENST00000609258 930 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN2BO60939 PABPC1P8-201ENST00000452851 2086 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 CDY10P-201ENST00000452415 1567 ntBASIC6.52□□□□□ -1.37
SCN2BO60939 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN2BO60939 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN2BO60939 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN2BO60939 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms