Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.39□□□□□ -1.39
SSX4O60224 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX4O60224 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.39□□□□□ -1.39
SSX4O60224 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 AC015849.6-201ENST00000605454 474 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AC007347.2-201ENST00000623044 180 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AC093909.6-201ENST00000624757 775 ntBASIC6.39□□□□□ -1.39
SSX4O60224 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX4O60224 AC073488.7-201ENST00000633785 778 ntBASIC6.39□□□□□ -1.39
SSX4O60224 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX4O60224 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 CLCA3P-203ENST00000490028 2781 ntBASIC6.38□□□□□ -1.39
SSX4O60224 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 AC022905.1-201ENST00000503430 3048 ntBASIC6.38□□□□□ -1.39
SSX4O60224 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 AC023886.2-201ENST00000321285 411 ntBASIC6.38□□□□□ -1.39
SSX4O60224 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 RNA5SP429-201ENST00000363688 109 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RNA5SP512-201ENST00000364550 120 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RNA5SP302-201ENST00000364896 100 ntBASIC6.38□□□□□ -1.39
SSX4O60224 ARMCX7P-201ENST00000372828 562 ntBASIC6.38□□□□□ -1.39
SSX4O60224 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
SSX4O60224 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSX4O60224 NPM1P31-201ENST00000399021 764 ntBASIC6.38□□□□□ -1.39
SSX4O60224 U3.31-201ENST00000408113 216 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 RNU4-64P-201ENST00000410795 131 ntBASIC6.38□□□□□ -1.39
SSX4O60224 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX4O60224 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX4O60224 NFYAP1-201ENST00000431953 972 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 RPS10P14-201ENST00000440748 502 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RPS7P4-201ENST00000444127 582 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RPL24P8-201ENST00000446071 474 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AL451074.4-201ENST00000447545 470 ntBASIC6.38□□□□□ -1.39
SSX4O60224 TDGF1P6-201ENST00000463873 448 ntBASIC6.38□□□□□ -1.39
SSX4O60224 RN7SL776P-201ENST00000493390 268 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX4O60224 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX4O60224 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX4O60224 TRAV11-201ENST00000539512 339 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.38□□□□□ -1.39
SSX4O60224 FAM30C-201ENST00000561158 410 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AC009955.2-201ENST00000597288 542 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX4O60224 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 AL136985.2-201ENST00000607372 535 ntBASIC6.38□□□□□ -1.39
SSX4O60224 AC012510.1-201ENST00000607946 759 ntBASIC6.38□□□□□ -1.39
SSX4O60224 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX4O60224 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 AC080112.3-201ENST00000612552 880 ntBASIC6.38□□□□□ -1.39
SSX4O60224 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
SSX4O60224 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SSX4O60224 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 BRD7P1-201ENST00000557705 1915 ntBASIC6.38□□□□□ -1.39
SSX4O60224 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 AC073365.1-203ENST00000641055 1992 ntBASIC6.38□□□□□ -1.39
SSX4O60224 ABCA11P-202ENST00000504019 2110 ntBASIC6.38□□□□□ -1.39
SSX4O60224 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX4O60224 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX4O60224 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 AC011504.1-201ENST00000623331 4103 ntBASIC6.37□□□□□ -1.39
SSX4O60224 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.37□□□□□ -1.39
SSX4O60224 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX4O60224 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
SSX4O60224 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX4O60224 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms