Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 NPM1P14-201ENST00000343743 866 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RNA5SP238-201ENST00000365464 120 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RNA5SP115-201ENST00000411160 107 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC009413.1-201ENST00000414823 399 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL139415.1-201ENST00000424862 352 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 HMGN2P24-201ENST00000433516 273 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC016734.1-201ENST00000436998 654 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 BX679664.2-201ENST00000439282 283 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RPL4P2-201ENST00000447259 1282 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SULT1D1P-201ENST00000458020 882 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RPS26P11-201ENST00000463445 348 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RN7SL563P-201ENST00000481233 298 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RN7SL272P-201ENST00000487762 289 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SNORA70.23-201ENST00000517218 151 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AP005639.1-201ENST00000526939 192 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC024270.1-201ENST00000559181 404 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RN7SL199P-201ENST00000578752 281 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RN7SL656P-201ENST00000579044 281 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RN7SL404P-201ENST00000582421 281 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL021918.1-201ENST00000603933 236 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 OR6L2P-201ENST00000608207 925 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC012488.1-201ENST00000611221 640 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 HCCAT5-202ENST00000642127 1029 ntBASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RBFOX3A6NFN3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 VN2R17P-201ENST00000391712 832 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 BMS1P12-201ENST00000428213 706 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC068137.1-201ENST00000429272 584 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC090954.1-201ENST00000445502 361 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 MARK2P8-201ENST00000476069 952 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL355076.1-201ENST00000484315 270 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 RPL7AP2-201ENST00000496515 740 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 POLB-211ENST00000521492 786 ntTSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 IGLV3-6-201ENST00000523937 250 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms