Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 AC009963.3-201ENST00000458090 486 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 NXPE2P1-201ENST00000543705 726 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 MIR4697-201ENST00000582977 78 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 AP000550.3-201ENST00000637734 379 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 EEF1B2P8-201ENST00000414101 671 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 RPL12P30-201ENST00000488389 499 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 RBBP4P1-201ENST00000502424 1276 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC093763.2-201ENST00000505334 1223 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC037198.3-201ENST00000616754 526 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC235565.1-201ENST00000456962 1325 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 RPS12P17-201ENST00000438591 377 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC090142.2-201ENST00000483263 416 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC026444.1-201ENST00000502592 496 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AL590032.1-201ENST00000604920 252 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AL080312.2-201ENST00000613001 630 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 SNX18P10-201ENST00000625014 519 ntBASIC6.39□□□□□ -1.39
CHD8Q9HCK8 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.39□□□□□ -1.39
CHD8Q9HCK8 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CUBNP1-201ENST00000412710 1790 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 HSPD1P9-201ENST00000420325 1636 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 RNA5SP278-201ENST00000517055 102 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms