Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MRPS21P5-201ENST00000417885 231 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC093816.1-201ENST00000515076 913 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AL953862.2-201ENST00000603089 820 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MIR7854-201ENST00000620068 65 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MIR1910-201ENST00000636955 80 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC105342.1-201ENST00000378334 6848 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AP005139.1-201ENST00000580702 1647 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC002069.1-201ENST00000429649 1159 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 ANP32BP1-202ENST00000568553 737 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AL078601.3-201ENST00000573303 535 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AC010333.3-201ENST00000615100 402 ntBASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.94□□□□□ -1.14
CDK5RAP2Q96SN8 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 RNA5SP321-201ENST00000362722 111 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 NPM1P23-201ENST00000440193 849 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SL369P-201ENST00000477138 299 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SL199P-201ENST00000578752 281 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SL656P-201ENST00000579044 281 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SL404P-201ENST00000582421 281 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC005828.7-201ENST00000607331 556 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AL683826.1-201ENST00000624104 627 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC183089.2-201ENST00000637931 916 ntBASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP2Q96SN8 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 AC117500.1-201ENST00000497352 755 ntBASIC7.92□□□□□ -1.14
CDK5RAP2Q96SN8 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms