Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 AC092794.2-201ENST00000620933 563 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 MIR3191-201ENST00000636300 76 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 FGL2-202ENST00000637771 989 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 AC009948.5-201ENST00000624360 4406 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 SALL1P1-201ENST00000438101 3837 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 AL158152.1-201ENST00000602652 1435 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 FADS2P1-201ENST00000611807 1446 ntBASIC8.46□□□□□ -1.06
FOXR1Q6PIV2 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC020895.2-201ENST00000624996 1839 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AP003119.3-201ENST00000566747 4192 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 Y_RNA.70-201ENST00000362886 110 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC073621.2-201ENST00000381380 1024 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RNU5A-2P-201ENST00000384337 116 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL603865.2-201ENST00000401679 213 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RN7SKP273-201ENST00000411392 314 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RPL36P2-201ENST00000426026 315 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RWDD4P2-201ENST00000426392 563 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 USP9YP31-201ENST00000431405 881 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 SFTPA3P-201ENST00000446429 367 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RPL7P45-201ENST00000455851 743 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 RN7SL870P-201ENST00000460111 296 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 DAZAP2P1-201ENST00000475212 503 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 STRADBP1-201ENST00000478954 1281 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC138853.1-201ENST00000503549 823 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 GTF2F2P1-201ENST00000511083 675 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 GAPDHP44-201ENST00000513513 1007 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 IGKV2D-18-201ENST00000519785 375 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 SNRPCP14-201ENST00000524498 205 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 NTAN1P3-201ENST00000535885 715 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC008870.2-201ENST00000568262 1024 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC073544.2-201ENST00000601155 540 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC090950.1-201ENST00000604625 830 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC103724.4-201ENST00000605981 292 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 MIR6807-201ENST00000621968 92 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL157359.3-201ENST00000623771 217 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC116618.1-201ENST00000634617 774 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AC138627.1-203ENST00000641872 1680 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 AL513523.1-201ENST00000417868 1309 ntBASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
FOXR1Q6PIV2 ATP8A2P3-201ENST00000426792 1536 ntBASIC8.44□□□□□ -1.06
FOXR1Q6PIV2 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms