Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CDC42BPAQ5VT25 AC125603.4-201ENST00000621942 2699 ntBASIC10.07□□□□□ -0.8
CDC42BPAQ5VT25 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 TMC3-AS1-206ENST00000612811 2726 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 RNA5SP110-201ENST00000362638 115 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AC244452.1-201ENST00000413798 141 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AL359839.1-201ENST00000451975 1160 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 RN7SL404P-201ENST00000582421 281 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AC010327.2-201ENST00000587647 488 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 AC091167.5-201ENST00000605689 894 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 MIR6811-201ENST00000620409 58 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 OR4C1P-202ENST00000641065 1569 ntBASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CDC42BPAQ5VT25 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 FTX-215ENST00000638681 9771 ntTSL 5 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 RPL12P13-201ENST00000310055 497 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 RN7SL221P-201ENST00000466190 281 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 RPL19P11-201ENST00000495944 589 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC067773.1-201ENST00000603284 1094 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AL157899.1-201ENST00000604110 936 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC005277.2-201ENST00000617898 390 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC131009.3-201ENST00000621809 287 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC073488.6-201ENST00000632293 754 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 EEF1A1P21-201ENST00000512363 1344 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 Z99129.4-201ENST00000624649 2435 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 AC083806.2-201ENST00000617795 2685 ntBASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CDC42BPAQ5VT25 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 SNORA11B-201ENST00000408175 129 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC022415.1-202ENST00000486612 523 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 LSM3P4-201ENST00000502948 309 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 CYCSP38-201ENST00000559840 322 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC023968.1-201ENST00000560719 475 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 MIR3614-201ENST00000581261 86 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC007448.1-201ENST00000582714 234 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AL589863.1-201ENST00000595383 631 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC004801.6-201ENST00000616571 978 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 VN2R1P-201ENST00000449668 1743 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 SNX18P24-201ENST00000505249 671 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 SSX8-201ENST00000506270 579 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 SNX18P25-201ENST00000510539 758 ntBASIC10.04□□□□□ -0.8
CDC42BPAQ5VT25 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms