Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 FO393409.1-201ENST00000399325 1372 ntBASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 AC111188.2-201ENST00000529697 1387 ntBASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RSPO4Q2I0M5 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MIPEPP2-201ENST00000422560 1819 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 NCAPD2P1-201ENST00000432906 1801 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 LINC01519-201ENST00000454178 2029 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 HERC2P8-202ENST00000564334 3705 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MED28P1-201ENST00000399158 571 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 RN7SKP251-201ENST00000410830 314 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL008987.1-201ENST00000415528 237 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 EIF4A1P13-201ENST00000415667 230 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MTND1P30-201ENST00000441241 901 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MTND5P20-201ENST00000448677 143 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC104978.1-201ENST00000449387 391 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR52E3P-201ENST00000452083 936 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 SNORA35.1-201ENST00000458908 128 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 RPS6P25-201ENST00000464444 748 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC080188.1-201ENST00000491923 567 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC008868.1-201ENST00000509786 737 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC016559.1-201ENST00000511420 199 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC138938.1-201ENST00000515431 782 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 RNU4-18P-201ENST00000516751 149 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR4A42P-201ENST00000531397 938 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC107958.1-201ENST00000556576 290 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OOSP1P2-201ENST00000579644 351 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR4G1P-201ENST00000588632 938 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 C8orf59P2-201ENST00000603441 271 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC135050.6-202ENST00000613584 392 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC005840.5-201ENST00000619166 599 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR5AK4P-201ENST00000635912 903 ntBASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RSPO4Q2I0M5 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL391988.1-201ENST00000614747 1553 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms