Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 RPL12P13-201ENST00000310055 497 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 RNA5SP321-201ENST00000362722 111 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AL133260.1-201ENST00000405720 405 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 MIR1204-201ENST00000408388 67 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 GAPDHP37-201ENST00000442317 968 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC099670.1-201ENST00000455141 783 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AL591767.3-201ENST00000554632 525 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC087575.1-201ENST00000585087 229 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 MIR6503-201ENST00000622884 86 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 CASC19-212ENST00000641153 1287 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC010132.4-201ENST00000569883 1368 ntBASIC8.24□□□□□ -1.09
PDS5AQ29RF7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.24□□□□□ -1.09
PDS5AQ29RF7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AL451064.2-201ENST00000623514 1654 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 SNORA7A-201ENST00000384765 139 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 MIR191-201ENST00000384873 92 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RNA5SP155-201ENST00000411154 129 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RPS18P1-201ENST00000447840 458 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 RN7SL37P-201ENST00000490461 307 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC026826.1-201ENST00000493002 361 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC138207.8-204ENST00000579588 527 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 CTSLP2-201ENST00000580501 394 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.23□□□□□ -1.09
PDS5AQ29RF7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PDS5AQ29RF7 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 AC132219.2-201ENST00000624416 2327 ntBASIC8.22□□□□□ -1.09
PDS5AQ29RF7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDS5AQ29RF7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms