Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC078909.2-201ENST00000620584 398 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC135068.4-201ENST00000622949 925 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC079298.2-201ENST00000623885 459 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC127071.1-201ENST00000624997 712 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC241377.2-202ENST00000636462 997 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AP000842.4-201ENST00000638781 748 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 CASC19-232ENST00000641480 1244 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 OR4C1P-202ENST00000641065 1569 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC007938.1-201ENST00000562524 2902 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.59□□□□□ -1.35
SUMO3P55854 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SUMO3P55854 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 RNU6-609P-201ENST00000365459 107 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SUMO3P55854 RPSAP44-201ENST00000406712 884 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 AC244452.1-201ENST00000413798 141 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 RPSAP1-201ENST00000421328 880 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AL121882.1-201ENST00000422893 417 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 ZNF965P-201ENST00000432501 817 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AC245047.1-201ENST00000433276 873 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 CR391992.1-201ENST00000438601 394 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC093799.1-201ENST00000452411 499 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC008620.1-201ENST00000468453 592 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AC105918.1-201ENST00000474399 838 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 MTATP6P9-201ENST00000515039 680 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC092868.3-201ENST00000560515 784 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 FRG2IP-201ENST00000563581 781 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.59□□□□□ -1.35
SUMO3P55854 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC023513.1-201ENST00000604396 691 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 BNIP3P31-201ENST00000604515 566 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AC018645.2-201ENST00000609151 472 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AL391834.1-201ENST00000609609 560 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SUMO3P55854 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC010872.1-201ENST00000624225 675 ntBASIC6.59□□□□□ -1.35
SUMO3P55854 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.59□□□□□ -1.35
SUMO3P55854 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.59□□□□□ -1.35
SUMO3P55854 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC6.59□□□□□ -1.35
SUMO3P55854 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
SUMO3P55854 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.59□□□□□ -1.36
SUMO3P55854 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SUMO3P55854 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
SUMO3P55854 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.59□□□□□ -1.36
SUMO3P55854 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms