Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPBQ9Y5S2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPBQ9Y5S2 AC005229.4-201ENST00000610085 2198 ntBASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 KRT18P16-201ENST00000510337 1294 ntBASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 AC116351.2-201ENST00000606540 1585 ntBASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.33■■■□□ 2.45
CDC42BPBQ9Y5S2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
CDC42BPBQ9Y5S2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 AC121338.2-201ENST00000622535 1744 ntBASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CDC42BPBQ9Y5S2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 AP006587.1-201ENST00000534129 1502 ntBASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
CDC42BPBQ9Y5S2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 FAM87A-204ENST00000613235 858 ntBASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 AC063952.2-201ENST00000498792 1227 ntBASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDC42BPBQ9Y5S2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 TFP1-202ENST00000475455 1573 ntBASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 RCC2P6-201ENST00000526625 1557 ntBASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDC42BPBQ9Y5S2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.28■■■□□ 2.44
CDC42BPBQ9Y5S2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC30.28■■■□□ 2.44
CDC42BPBQ9Y5S2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CDC42BPBQ9Y5S2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDC42BPBQ9Y5S2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 AC097488.1-201ENST00000507834 756 ntBASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.27■■■□□ 2.44
CDC42BPBQ9Y5S2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms