Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB1Q9Y5G3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 TSPY26P-201ENST00000476365 1326 ntBASIC18.21■□□□□ 0.51
PCDHGB1Q9Y5G3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGB1Q9Y5G3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGB1Q9Y5G3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 LINC01465-201ENST00000408887 1940 ntBASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 AC245052.3-201ENST00000450182 901 ntBASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 AC008764.7-201ENST00000593779 1081 ntBASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 BX119927.1-201ENST00000636596 1552 ntBASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB1Q9Y5G3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 MIR572-201ENST00000384983 95 ntBASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 AC027682.1-201ENST00000562846 899 ntBASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB1Q9Y5G3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 AC099791.1-201ENST00000416440 715 ntBASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms