Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EXOSC1Q9Y3B2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 SLC7A5P2-201ENST00000553010 536 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L2-201ENST00000561772 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 AC243732.1-201ENST00000612648 864 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L6-201ENST00000626483 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L1-201ENST00000627662 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L8-201ENST00000629013 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L3-201ENST00000630187 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L7-201ENST00000630678 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DUX4L5-201ENST00000630834 1275 ntBASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.81■□□□□ 0.44
EXOSC1Q9Y3B2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 LINC01465-201ENST00000408887 1940 ntBASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.8■□□□□ 0.44
EXOSC1Q9Y3B2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 PGM5P4-201ENST00000421970 445 ntBASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 AC105265.2-201ENST00000467189 838 ntBASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 AL032819.2-201ENST00000624543 2162 ntBASIC17.79■□□□□ 0.44
EXOSC1Q9Y3B2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms