Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 AC013268.1-206ENST00000638368 961 ntBASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 AC112229.1-201ENST00000639295 961 ntBASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHMP2BQ9UQN3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AC018445.3-201ENST00000624177 1945 ntBASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AC034268.1-201ENST00000441047 882 ntBASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AC093484.2-201ENST00000580996 2166 ntBASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 AC098818.2-201ENST00000564925 2320 ntBASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2BQ9UQN3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 AC007322.4-201ENST00000509611 723 ntBASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHMP2BQ9UQN3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 AC005332.7-201ENST00000614046 2005 ntBASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 AL162412.1-201ENST00000567129 965 ntBASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP2BQ9UQN3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP2BQ9UQN3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms