Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 NBPF21P-201ENST00000425093 1451 ntBASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UBQLN1Q9UMX0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 AC116351.2-201ENST00000606540 1585 ntBASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 BX119927.1-201ENST00000636596 1552 ntBASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 RPS2P4-201ENST00000476944 856 ntBASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN1Q9UMX0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UBQLN1Q9UMX0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 MIR718-201ENST00000390190 70 ntBASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN1Q9UMX0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN1Q9UMX0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms