Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 AC104771.1-201ENST00000603335 964 ntBASIC20.3■□□□□ 0.84
UBP1Q9NZI7 AL031963.3-201ENST00000606441 850 ntBASIC20.3■□□□□ 0.84
UBP1Q9NZI7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UBP1Q9NZI7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.29■□□□□ 0.84
UBP1Q9NZI7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
UBP1Q9NZI7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.29■□□□□ 0.84
UBP1Q9NZI7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 KRT8P20-201ENST00000423953 1409 ntBASIC20.28■□□□□ 0.84
UBP1Q9NZI7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 AC091874.3-201ENST00000512672 1195 ntBASIC20.28■□□□□ 0.84
UBP1Q9NZI7 MIR4758-201ENST00000577688 71 ntBASIC20.28■□□□□ 0.84
UBP1Q9NZI7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBP1Q9NZI7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 HLA-L-209ENST00000420110 1011 ntBASIC20.27■□□□□ 0.84
UBP1Q9NZI7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBP1Q9NZI7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBP1Q9NZI7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
UBP1Q9NZI7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.25■□□□□ 0.83
UBP1Q9NZI7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms