Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SND1-IT1Q9HBX3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SND1-IT1Q9HBX3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.33□□□□□ -0.27
SND1-IT1Q9HBX3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SND1-IT1Q9HBX3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SND1-IT1Q9HBX3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 UNC93B3-201ENST00000308076 687 ntBASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 AL136116.3-201ENST00000402907 1138 ntBASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 AC008764.7-201ENST00000593779 1081 ntBASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.32□□□□□ -0.28
SND1-IT1Q9HBX3 TMEM179-206ENST00000616017 1645 ntBASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 AC026471.1-201ENST00000564629 3026 ntBASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 AC093484.2-201ENST00000580996 2166 ntBASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms