Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MAP1LC3AQ9H492 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 SMUG1P1-201ENST00000590640 811 ntBASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MAP1LC3AQ9H492 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 AL691432.2-201ENST00000607222 2038 ntBASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MAP1LC3AQ9H492 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
MAP1LC3AQ9H492 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 MIR2861-201ENST00000636310 90 ntBASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MAP1LC3AQ9H492 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms