Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.87■■□□□ 1.09
HIPK3Q9H422 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.87■■□□□ 1.09
HIPK3Q9H422 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.87■■□□□ 1.09
HIPK3Q9H422 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK3Q9H422 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.86■■□□□ 1.09
HIPK3Q9H422 ECEL1P2-202ENST00000465689 757 ntBASIC21.86■■□□□ 1.09
HIPK3Q9H422 EGLN1P1-201ENST00000531623 762 ntBASIC21.86■■□□□ 1.09
HIPK3Q9H422 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 C1QL1P1-201ENST00000568105 661 ntBASIC21.86■■□□□ 1.09
HIPK3Q9H422 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 AP005242.2-201ENST00000580065 1175 ntBASIC21.86■■□□□ 1.09
HIPK3Q9H422 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.86■■□□□ 1.09
HIPK3Q9H422 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK3Q9H422 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK3Q9H422 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK3Q9H422 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK3Q9H422 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.85■■□□□ 1.09
HIPK3Q9H422 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.84■■□□□ 1.09
HIPK3Q9H422 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 TSPY14P-201ENST00000303979 915 ntBASIC21.84■■□□□ 1.09
HIPK3Q9H422 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.84■■□□□ 1.09
HIPK3Q9H422 DGCR10-201ENST00000609839 495 ntBASIC21.84■■□□□ 1.09
HIPK3Q9H422 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
HIPK3Q9H422 AL445675.2-201ENST00000620291 557 ntBASIC21.84■■□□□ 1.09
HIPK3Q9H422 AC233723.2-201ENST00000623798 2106 ntBASIC21.84■■□□□ 1.09
HIPK3Q9H422 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.84■■□□□ 1.09
HIPK3Q9H422 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK3Q9H422 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIPK3Q9H422 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.83■■□□□ 1.09
HIPK3Q9H422 AP006587.1-201ENST00000534129 1502 ntBASIC21.83■■□□□ 1.09
HIPK3Q9H422 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIPK3Q9H422 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
HIPK3Q9H422 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HIPK3Q9H422 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.83■■□□□ 1.08
HIPK3Q9H422 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIPK3Q9H422 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HIPK3Q9H422 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIPK3Q9H422 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.82■■□□□ 1.08
HIPK3Q9H422 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIPK3Q9H422 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HIPK3Q9H422 B3GAT3P1-201ENST00000471720 806 ntBASIC21.82■■□□□ 1.08
HIPK3Q9H422 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HIPK3Q9H422 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.82■■□□□ 1.08
HIPK3Q9H422 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIPK3Q9H422 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIPK3Q9H422 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIPK3Q9H422 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIPK3Q9H422 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIPK3Q9H422 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms