Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
MMP28Q9H239 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP28Q9H239 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP28Q9H239 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP28Q9H239 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MMP28Q9H239 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MMP28Q9H239 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.52■□□□□ 0.4
MMP28Q9H239 MIR6821-201ENST00000617625 74 ntBASIC17.52■□□□□ 0.4
MMP28Q9H239 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP28Q9H239 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP28Q9H239 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MMP28Q9H239 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.52■□□□□ 0.39
MMP28Q9H239 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP28Q9H239 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MMP28Q9H239 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP28Q9H239 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP28Q9H239 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP28Q9H239 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
MMP28Q9H239 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MMP28Q9H239 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 PCDHB18P-201ENST00000524813 2368 ntBASIC17.51■□□□□ 0.39
MMP28Q9H239 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP28Q9H239 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
MMP28Q9H239 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP28Q9H239 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP28Q9H239 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MMP28Q9H239 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
MMP28Q9H239 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 AC092720.2-201ENST00000602388 1665 ntBASIC17.51■□□□□ 0.39
MMP28Q9H239 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP28Q9H239 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP28Q9H239 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP28Q9H239 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP28Q9H239 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 IRS3P-201ENST00000223076 1006 ntBASIC17.5■□□□□ 0.39
MMP28Q9H239 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP28Q9H239 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP28Q9H239 AC097381.1-201ENST00000429019 1296 ntBASIC17.5■□□□□ 0.39
MMP28Q9H239 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP28Q9H239 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
MMP28Q9H239 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MMP28Q9H239 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MMP28Q9H239 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP28Q9H239 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP28Q9H239 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MMP28Q9H239 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP28Q9H239 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.49■□□□□ 0.39
MMP28Q9H239 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP28Q9H239 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP28Q9H239 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP28Q9H239 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP28Q9H239 AC087623.3-201ENST00000607047 1098 ntBASIC17.49■□□□□ 0.39
MMP28Q9H239 AL354811.1-201ENST00000610286 706 ntBASIC17.49■□□□□ 0.39
MMP28Q9H239 Z82202.1-201ENST00000623446 1880 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms