Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2J3Q9H1A7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.38■□□□□ 0.53
POLR2J3Q9H1A7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 AL020996.1-203ENST00000536896 2307 ntBASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 AC098818.2-201ENST00000564925 2320 ntBASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
POLR2J3Q9H1A7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 RARRES2P4-201ENST00000514074 484 ntBASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR2J3Q9H1A7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2J3Q9H1A7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms