Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC093915.1-201ENST00000605740 1543 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AL359922.3-201ENST00000624779 1670 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC020928.2-201ENST00000588717 2197 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC00619-201ENST00000374432 1121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC006378.1-201ENST00000426193 563 ntTSL 4 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 ATP5HP2-201ENST00000433885 485 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AL590762.3-201ENST00000436372 640 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC116353.3-201ENST00000511215 249 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC234778.2-201ENST00000566241 354 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC068594.2-201ENST00000584075 597 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC009303.3-201ENST00000591103 736 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC008536.1-201ENST00000602872 669 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC087565.3-203ENST00000641018 837 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 AC244636.2-201ENST00000448031 1669 ntBASIC12.29□□□□□ -0.44
KRTAP3-3Q9BYR6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 RPL7P13-201ENST00000415103 741 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 HMGN1P10-201ENST00000474557 553 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 RBM48P1-201ENST00000509661 1102 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AL049870.2-201ENST00000554389 693 ntTSL 3 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC108704.1-201ENST00000611714 744 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC231759.1-201ENST00000616455 597 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AC103703.1-201ENST00000634783 663 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 CHML-205ENST00000638160 705 ntTSL 3 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AL133243.2-201ENST00000610331 1621 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 AL513548.1-201ENST00000562904 1724 ntBASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC12.28□□□□□ -0.44
KRTAP3-3Q9BYR6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KRTAP3-3Q9BYR6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KRTAP3-3Q9BYR6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12.27□□□□□ -0.44
KRTAP3-3Q9BYR6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
KRTAP3-3Q9BYR6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 RNU6-797P-201ENST00000363101 109 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 MTND1P23-201ENST00000416931 372 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 TIMM9P2-201ENST00000419324 266 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 AC090960.1-201ENST00000421072 306 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 OR5BE1P-201ENST00000425977 939 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 ZNF863P-201ENST00000426746 417 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 MTHFD2P6-201ENST00000506170 1022 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 ANP32BP3-201ENST00000559213 706 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 MTCO3P24-201ENST00000572729 782 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 METTL23-211ENST00000589977 617 ntTSL 3 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 AL445223.1-201ENST00000595998 1051 ntBASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP3-3Q9BYR6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms