Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC008040.2-201ENST00000461049 708 ntBASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 C1QL1P1-201ENST00000568105 661 ntBASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM87A-204ENST00000613235 858 ntBASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 AF106564.1-201ENST00000607058 2553 ntBASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
KRTAP4-1Q9BYQ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AC005229.4-201ENST00000610085 2198 ntBASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AC004980.1-204ENST00000429707 299 ntBASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 AL031985.4-201ENST00000642138 673 ntBASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 KRT8P20-201ENST00000423953 1409 ntBASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 KRT8P17-201ENST00000453110 1448 ntBASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
KRTAP4-1Q9BYQ7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 TSPY14P-201ENST00000303979 915 ntBASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP4-1Q9BYQ7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms