Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 CD72-202ENST00000378430 585 ntTSL 3 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 HES6-204ENST00000409182 863 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 ATP5G2P3-201ENST00000429083 425 ntBASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AC103724.3-201ENST00000564481 992 ntBASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AC092028.1-203ENST00000608262 953 ntBASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AC093484.2-201ENST00000580996 2166 ntBASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 TMEM179-206ENST00000616017 1645 ntBASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LCE3DQ9BYE3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC5.36□□□□□ -1.55
LCE3DQ9BYE3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms