Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC3Q9BY71 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AL353807.1-201ENST00000427475 662 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 FAM210CP-201ENST00000445714 574 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AP003071.4-201ENST00000562276 1284 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AL353708.3-201ENST00000610272 989 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 AC006128.1-201ENST00000624704 1661 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 FP700111.2-201ENST00000619190 1892 ntBASIC20.85■□□□□ 0.93
LRRC3Q9BY71 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3Q9BY71 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 FAM197Y1-201ENST00000421178 764 ntBASIC20.84■□□□□ 0.93
LRRC3Q9BY71 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 AC073195.1-201ENST00000607241 877 ntBASIC20.84■□□□□ 0.93
LRRC3Q9BY71 AC097493.4-201ENST00000641197 219 ntBASIC20.84■□□□□ 0.93
LRRC3Q9BY71 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3Q9BY71 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3Q9BY71 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC3Q9BY71 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC3Q9BY71 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.83■□□□□ 0.92
LRRC3Q9BY71 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 AC004264.1-201ENST00000608354 794 ntBASIC20.82■□□□□ 0.92
LRRC3Q9BY71 AC133561.5-201ENST00000635547 218 ntBASIC20.82■□□□□ 0.92
LRRC3Q9BY71 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC3Q9BY71 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 AL355355.2-201ENST00000442321 338 ntBASIC20.81■□□□□ 0.92
LRRC3Q9BY71 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LRRC3Q9BY71 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms