Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 AL031963.3-201ENST00000606441 850 ntBASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 AL359736.2-201ENST00000621992 437 ntBASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSBP3Q9BWW4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 PTBP1P-201ENST00000554374 1601 ntBASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 DPP3P2-201ENST00000416030 1696 ntBASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 RPPH1-201ENST00000516869 333 ntBASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 PRKY-204ENST00000533551 1019 ntBASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 AC092667.1-201ENST00000434301 2586 ntBASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SSBP3Q9BWW4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 AC093827.2-201ENST00000512654 315 ntBASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.59■□□□□ 0.25
SSBP3Q9BWW4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms