Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 AC091305.1-201ENST00000479476 895 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L2-201ENST00000561772 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 AF213884.3-201ENST00000563833 479 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L6-201ENST00000626483 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L1-201ENST00000627662 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L8-201ENST00000629013 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L3-201ENST00000630187 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L7-201ENST00000630678 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DUX4L5-201ENST00000630834 1275 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 AC020763.4-201ENST00000623414 4170 ntBASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 MIR939-201ENST00000401314 82 ntBASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 AC091799.1-201ENST00000422823 811 ntBASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 AC106739.1-201ENST00000617035 715 ntBASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NSMCE2Q96MF7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 AC093503.3-201ENST00000624917 2352 ntBASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 AC096631.2-201ENST00000436136 790 ntBASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NSMCE2Q96MF7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NSMCE2Q96MF7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NSMCE2Q96MF7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NSMCE2Q96MF7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NSMCE2Q96MF7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 AC105265.2-201ENST00000467189 838 ntBASIC18.75■□□□□ 0.59
NSMCE2Q96MF7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms