Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21■□□□□ 0.95
SMARCD1Q96GM5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21■□□□□ 0.95
SMARCD1Q96GM5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 KRASP1-201ENST00000407852 552 ntBASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 AL162377.1-201ENST00000618844 1793 ntBASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCD1Q96GM5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 AC092667.1-201ENST00000434301 2586 ntBASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCD1Q96GM5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 UBE2SP1-201ENST00000450587 669 ntBASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 AC066615.1-201ENST00000640911 628 ntBASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 AC116351.2-201ENST00000606540 1585 ntBASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCD1Q96GM5 PHGDH-210ENST00000641115 1638 ntBASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 AC110285.5-201ENST00000611501 352 ntBASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCD1Q96GM5 LINC01006-201ENST00000333319 2292 ntBASIC20.95■□□□□ 0.95
SMARCD1Q96GM5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 AL157384.1-201ENST00000445995 2473 ntBASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.95■□□□□ 0.94
SMARCD1Q96GM5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms