Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 AC125437.2-201ENST00000625180 2167 ntBASIC21.09■□□□□ 0.97
TRIM11Q96F44 KRT17P1-201ENST00000399211 1546 ntBASIC21.09■□□□□ 0.97
TRIM11Q96F44 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 LSM12P1-201ENST00000411836 588 ntBASIC21.08■□□□□ 0.97
TRIM11Q96F44 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM11Q96F44 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM11Q96F44 AL137784.2-201ENST00000607332 1000 ntBASIC21.08■□□□□ 0.97
TRIM11Q96F44 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM11Q96F44 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM11Q96F44 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.08■□□□□ 0.96
TRIM11Q96F44 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM11Q96F44 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
TRIM11Q96F44 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM11Q96F44 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM11Q96F44 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM11Q96F44 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 AP001271.2-201ENST00000624018 1556 ntBASIC21.07■□□□□ 0.96
TRIM11Q96F44 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM11Q96F44 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM11Q96F44 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM11Q96F44 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM11Q96F44 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 AF201337.1-201ENST00000520239 748 ntBASIC21.05■□□□□ 0.96
TRIM11Q96F44 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 RNF165-205ENST00000588679 2904 ntBASIC21.05■□□□□ 0.96
TRIM11Q96F44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM11Q96F44 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM11Q96F44 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 MKRN4P-201ENST00000444706 1521 ntBASIC21.04■□□□□ 0.96
TRIM11Q96F44 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 AC026185.1-201ENST00000445748 174 ntBASIC21.04■□□□□ 0.96
TRIM11Q96F44 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM11Q96F44 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 IKBKGP1-201ENST00000612193 1073 ntBASIC21.04■□□□□ 0.96
TRIM11Q96F44 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM11Q96F44 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms