Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 CYP21A1P-202ENST00000354927 1481 ntBASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
TUBGCP3Q96CW5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 TERF1P5-201ENST00000477545 1207 ntBASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 TREX1-205ENST00000625293 1783 ntBASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBGCP3Q96CW5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 ZNRF2P3-201ENST00000424200 374 ntBASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 AC010536.3-201ENST00000620306 533 ntBASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBGCP3Q96CW5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 AC098818.2-201ENST00000564925 2320 ntBASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 AC093484.2-201ENST00000580996 2166 ntBASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 AC005332.7-201ENST00000614046 2005 ntBASIC19.29■□□□□ 0.68
TUBGCP3Q96CW5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 BX323043.1-201ENST00000641006 1765 ntBASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBGCP3Q96CW5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms