Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 NCF1B-203ENST00000435988 1254 ntBASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 GUSBP6-202ENST00000438529 1198 ntBASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RHBDF1Q96CC6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDF1Q96CC6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDF1Q96CC6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 TSPY6P-201ENST00000448518 926 ntBASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 AC009237.14-201ENST00000609975 1594 ntBASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDF1Q96CC6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDF1Q96CC6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDF1Q96CC6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDF1Q96CC6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms