Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SMG8-203ENST00000578922 2178 ntBASIC17.89■□□□□ 0.45
CPNE4Q96A23 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 POM121L13P-201ENST00000422362 380 ntBASIC17.89■□□□□ 0.45
CPNE4Q96A23 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 AC120498.8-201ENST00000614275 531 ntBASIC17.89■□□□□ 0.45
CPNE4Q96A23 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 AC006058.3-201ENST00000606217 1069 ntBASIC17.88■□□□□ 0.45
CPNE4Q96A23 ITM2C-210ENST00000620962 501 ntBASIC17.88■□□□□ 0.45
CPNE4Q96A23 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE4Q96A23 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE4Q96A23 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE4Q96A23 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE4Q96A23 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 KRT18P29-201ENST00000397031 1267 ntBASIC17.86■□□□□ 0.45
CPNE4Q96A23 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE4Q96A23 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE4Q96A23 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE4Q96A23 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE4Q96A23 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE4Q96A23 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms