Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLNQ969V3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLNQ969V3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLNQ969V3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NCLNQ969V3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.27■□□□□ 0.68
NCLNQ969V3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NCLNQ969V3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NCLNQ969V3 CDV3P1-201ENST00000471403 739 ntBASIC19.27■□□□□ 0.68
NCLNQ969V3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.27■□□□□ 0.68
NCLNQ969V3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 OR10C1-204ENST00000622521 1039 ntBASIC19.27■□□□□ 0.68
NCLNQ969V3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NCLNQ969V3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NCLNQ969V3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCLNQ969V3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
NCLNQ969V3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCLNQ969V3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCLNQ969V3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCLNQ969V3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCLNQ969V3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.27■□□□□ 0.67
NCLNQ969V3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCLNQ969V3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.26■□□□□ 0.67
NCLNQ969V3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NCLNQ969V3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.26■□□□□ 0.67
NCLNQ969V3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCLNQ969V3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.26■□□□□ 0.67
NCLNQ969V3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NCLNQ969V3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NCLNQ969V3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.26■□□□□ 0.67
NCLNQ969V3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.26■□□□□ 0.67
NCLNQ969V3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCLNQ969V3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NCLNQ969V3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.25■□□□□ 0.67
NCLNQ969V3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 AC093787.1-201ENST00000450396 207 ntBASIC19.25■□□□□ 0.67
NCLNQ969V3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.25■□□□□ 0.67
NCLNQ969V3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.25■□□□□ 0.67
NCLNQ969V3 RARRES2P4-201ENST00000514074 484 ntBASIC19.25■□□□□ 0.67
NCLNQ969V3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLNQ969V3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLNQ969V3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLNQ969V3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
NCLNQ969V3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCLNQ969V3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
NCLNQ969V3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NCLNQ969V3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.24■□□□□ 0.67
NCLNQ969V3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.24■□□□□ 0.67
NCLNQ969V3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NCLNQ969V3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLNQ969V3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.24■□□□□ 0.67
NCLNQ969V3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.24■□□□□ 0.67
NCLNQ969V3 AC007322.3-201ENST00000426526 701 ntBASIC19.24■□□□□ 0.67
NCLNQ969V3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 GUSBP6-202ENST00000438529 1198 ntBASIC19.24■□□□□ 0.67
NCLNQ969V3 TSPY6P-201ENST00000448518 926 ntBASIC19.24■□□□□ 0.67
NCLNQ969V3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.24■□□□□ 0.67
NCLNQ969V3 FAM21FP-204ENST00000608637 956 ntBASIC19.24■□□□□ 0.67
NCLNQ969V3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLNQ969V3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLNQ969V3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms