Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.89■□□□□ 0.45
PTP4A1Q93096 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.89■□□□□ 0.45
PTP4A1Q93096 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.89■□□□□ 0.45
PTP4A1Q93096 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 PTBP1P-201ENST00000554374 1601 ntBASIC17.89■□□□□ 0.45
PTP4A1Q93096 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.89■□□□□ 0.45
PTP4A1Q93096 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 LETM1P2-201ENST00000597330 2178 ntBASIC17.89■□□□□ 0.45
PTP4A1Q93096 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 AC010536.3-201ENST00000620306 533 ntBASIC17.88■□□□□ 0.45
PTP4A1Q93096 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTP4A1Q93096 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTP4A1Q93096 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 AC006015.1-201ENST00000429970 570 ntBASIC17.87■□□□□ 0.45
PTP4A1Q93096 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.87■□□□□ 0.45
PTP4A1Q93096 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 AC009237.14-201ENST00000609975 1594 ntBASIC17.87■□□□□ 0.45
PTP4A1Q93096 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTP4A1Q93096 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 AL162412.1-201ENST00000567129 965 ntBASIC17.86■□□□□ 0.45
PTP4A1Q93096 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 AC016405.3-201ENST00000607710 860 ntBASIC17.86■□□□□ 0.45
PTP4A1Q93096 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.86■□□□□ 0.45
PTP4A1Q93096 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.86■□□□□ 0.45
PTP4A1Q93096 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTP4A1Q93096 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.85■□□□□ 0.45
PTP4A1Q93096 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 KRT8P17-201ENST00000453110 1448 ntBASIC17.85■□□□□ 0.45
PTP4A1Q93096 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A1Q93096 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms