Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP7Q93009 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.67■□□□□ 0.74
USP7Q93009 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.67■□□□□ 0.74
USP7Q93009 KRT17P3-201ENST00000420566 1262 ntBASIC19.67■□□□□ 0.74
USP7Q93009 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.67■□□□□ 0.74
USP7Q93009 FAM197Y4-202ENST00000622692 608 ntBASIC19.67■□□□□ 0.74
USP7Q93009 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.67■□□□□ 0.74
USP7Q93009 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP7Q93009 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP7Q93009 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
USP7Q93009 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP7Q93009 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
USP7Q93009 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.66■□□□□ 0.74
USP7Q93009 C1QBPP2-201ENST00000528754 825 ntBASIC19.66■□□□□ 0.74
USP7Q93009 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP7Q93009 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.66■□□□□ 0.74
USP7Q93009 AC099778.1-201ENST00000568593 1911 ntBASIC19.66■□□□□ 0.74
USP7Q93009 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP7Q93009 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP7Q93009 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.65■□□□□ 0.74
USP7Q93009 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.65■□□□□ 0.74
USP7Q93009 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.65■□□□□ 0.74
USP7Q93009 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.65■□□□□ 0.74
USP7Q93009 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.65■□□□□ 0.74
USP7Q93009 RPPH1-201ENST00000516869 333 ntBASIC19.65■□□□□ 0.74
USP7Q93009 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.65■□□□□ 0.74
USP7Q93009 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP7Q93009 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.65■□□□□ 0.74
USP7Q93009 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP7Q93009 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP7Q93009 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.65■□□□□ 0.74
USP7Q93009 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP7Q93009 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
USP7Q93009 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP7Q93009 AL391422.3-201ENST00000603791 2761 ntBASIC19.64■□□□□ 0.73
USP7Q93009 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.64■□□□□ 0.73
USP7Q93009 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.64■□□□□ 0.73
USP7Q93009 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USP7Q93009 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.64■□□□□ 0.73
USP7Q93009 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.64■□□□□ 0.73
USP7Q93009 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
USP7Q93009 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.64■□□□□ 0.73
USP7Q93009 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP7Q93009 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.63■□□□□ 0.73
USP7Q93009 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP7Q93009 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP7Q93009 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
USP7Q93009 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms