Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 AC133681.1-201ENST00000465482 601 ntBASIC18.09■□□□□ 0.49
RNF138Q8WVD3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RNF138Q8WVD3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 AL391422.3-201ENST00000603791 2761 ntBASIC18.08■□□□□ 0.49
RNF138Q8WVD3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
RNF138Q8WVD3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.08■□□□□ 0.48
RNF138Q8WVD3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF138Q8WVD3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 KRT18P29-201ENST00000397031 1267 ntBASIC18.07■□□□□ 0.48
RNF138Q8WVD3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 AC098590.1-201ENST00000468126 897 ntBASIC18.07■□□□□ 0.48
RNF138Q8WVD3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.07■□□□□ 0.48
RNF138Q8WVD3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF138Q8WVD3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 TMEM179-206ENST00000616017 1645 ntBASIC18.06■□□□□ 0.48
RNF138Q8WVD3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF138Q8WVD3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms