Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 ECEL1P2-202ENST00000465689 757 ntBASIC24.41■■□□□ 1.5
SNED1Q8TER0 AC011506.1-201ENST00000474329 610 ntBASIC24.41■■□□□ 1.5
SNED1Q8TER0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 EGLN1P1-201ENST00000531623 762 ntBASIC24.41■■□□□ 1.5
SNED1Q8TER0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNED1Q8TER0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 AC004980.1-204ENST00000429707 299 ntBASIC24.4■■□□□ 1.5
SNED1Q8TER0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 AC087388.1-201ENST00000571370 1112 ntBASIC24.4■■□□□ 1.5
SNED1Q8TER0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNED1Q8TER0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.4■■□□□ 1.5
SNED1Q8TER0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.39■■□□□ 1.5
SNED1Q8TER0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.39■■□□□ 1.5
SNED1Q8TER0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.39■■□□□ 1.5
SNED1Q8TER0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNED1Q8TER0 AC063952.2-201ENST00000498792 1227 ntBASIC24.39■■□□□ 1.5
SNED1Q8TER0 C2orf69P3-201ENST00000565542 1120 ntBASIC24.39■■□□□ 1.5
SNED1Q8TER0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.39■■□□□ 1.5
SNED1Q8TER0 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.39■■□□□ 1.5
SNED1Q8TER0 Z98882.1-201ENST00000622160 2253 ntBASIC24.39■■□□□ 1.5
SNED1Q8TER0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SNED1Q8TER0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.39■■□□□ 1.49
SNED1Q8TER0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 KRT8P20-201ENST00000423953 1409 ntBASIC24.38■■□□□ 1.49
SNED1Q8TER0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNED1Q8TER0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.38■■□□□ 1.49
SNED1Q8TER0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNED1Q8TER0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.37■■□□□ 1.49
SNED1Q8TER0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNED1Q8TER0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.37■■□□□ 1.49
SNED1Q8TER0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNED1Q8TER0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.37■■□□□ 1.49
SNED1Q8TER0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNED1Q8TER0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
SNED1Q8TER0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 HLA-G-202ENST00000376815 851 ntBASIC24.36■■□□□ 1.49
SNED1Q8TER0 HLA-G-203ENST00000376818 1127 ntBASIC24.36■■□□□ 1.49
SNED1Q8TER0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SNED1Q8TER0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNED1Q8TER0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNED1Q8TER0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
SNED1Q8TER0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms