Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 KRT17P2-201ENST00000300992 1314 ntBASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3RF3Q8TEJ3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 BX088651.1-201ENST00000540551 451 ntBASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 MIR4785-201ENST00000585005 73 ntBASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 AC004264.1-201ENST00000608354 794 ntBASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH3RF3Q8TEJ3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 AL355075.4-201ENST00000554988 638 ntBASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SH3RF3Q8TEJ3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 FAM197Y1-201ENST00000421178 764 ntBASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 CD177P1-201ENST00000606252 935 ntBASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 REXO1L12P-201ENST00000622156 912 ntBASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SH3RF3Q8TEJ3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 KRT16P6-202ENST00000425692 1426 ntBASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.71■■□□□ 1.39
SH3RF3Q8TEJ3 AC116351.2-201ENST00000606540 1585 ntBASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 AC211429.1-201ENST00000415277 523 ntBASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 ECEL1P3-201ENST00000427961 737 ntBASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 AC026471.5-201ENST00000615068 467 ntBASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SH3RF3Q8TEJ3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 AC018553.1-201ENST00000616682 1458 ntBASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 AL353807.1-201ENST00000427475 662 ntBASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SH3RF3Q8TEJ3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms