Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 AL023803.3-201ENST00000615559 522 ntBASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 PCED1CP-201ENST00000419887 785 ntBASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 VENTXP5-201ENST00000523979 775 ntBASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 AC008622.2-201ENST00000617006 1229 ntBASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ALMS1Q8TCU4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 SPDYE15P-201ENST00000424157 909 ntBASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.52□□□□□ -0.24
ALMS1Q8TCU4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 SLC25A1P2-201ENST00000430693 912 ntBASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ALMS1Q8TCU4 AC092338.2-201ENST00000568827 1415 ntBASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AL441883.1-201ENST00000566170 1045 ntBASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AC010653.2-201ENST00000623505 997 ntBASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AC012313.10-201ENST00000623509 926 ntBASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ALMS1Q8TCU4 AL845331.1-201ENST00000424978 1190 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms