Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLL1Q8TB92 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 AC083880.1-201ENST00000608266 535 ntBASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLL1Q8TB92 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLL1Q8TB92 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 AC098818.2-201ENST00000564925 2320 ntBASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMGCLL1Q8TB92 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLL1Q8TB92 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms