Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 TMEM179-206ENST00000616017 1645 ntBASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC2Q8TAQ2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC2Q8TAQ2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 MIR4651-201ENST00000582622 73 ntBASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC2Q8TAQ2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 TSPY20P-201ENST00000450910 630 ntBASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.33■■□□□ 1.33
SMARCC2Q8TAQ2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 KRT8P17-201ENST00000453110 1448 ntBASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.33■■□□□ 1.32
SMARCC2Q8TAQ2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC2Q8TAQ2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 ABHD17AP1-201ENST00000358206 933 ntBASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC2Q8TAQ2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms