Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AP006587.1-201ENST00000534129 1502 ntBASIC15.57■□□□□ 0.08
LINC01006Q8NI28 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 KRT18P35-201ENST00000510488 1269 ntBASIC15.56■□□□□ 0.08
LINC01006Q8NI28 AL590326.2-201ENST00000625139 305 ntBASIC15.56■□□□□ 0.08
LINC01006Q8NI28 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 KRT18P22-201ENST00000402024 1347 ntBASIC15.56■□□□□ 0.08
LINC01006Q8NI28 CYP2D8P-201ENST00000433633 1490 ntBASIC15.56■□□□□ 0.08
LINC01006Q8NI28 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC01006Q8NI28 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 AC005229.4-201ENST00000610085 2198 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 FP700111.2-201ENST00000619190 1892 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 ARMC10P1-201ENST00000313754 855 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 AC113347.1-201ENST00000413321 391 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 AC010947.1-201ENST00000623454 693 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 AL031985.4-201ENST00000642138 673 ntBASIC15.55■□□□□ 0.08
LINC01006Q8NI28 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01006Q8NI28 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 C1QL1P1-201ENST00000568105 661 ntBASIC15.54■□□□□ 0.08
LINC01006Q8NI28 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 AC012676.1-201ENST00000574705 1949 ntBASIC15.54■□□□□ 0.08
LINC01006Q8NI28 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01006Q8NI28 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 AL137013.1-201ENST00000432946 1228 ntBASIC15.53■□□□□ 0.08
LINC01006Q8NI28 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01006Q8NI28 DPP3P2-201ENST00000416030 1696 ntBASIC15.53■□□□□ 0.08
LINC01006Q8NI28 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms