Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA6DQ8NFY4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.38
SEMA6DQ8NFY4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SEMA6DQ8NFY4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 RARRES2P4-201ENST00000514074 484 ntBASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 AC100791.3-201ENST00000617619 330 ntBASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA6DQ8NFY4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 AC068338.2-201ENST00000563278 1430 ntBASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA6DQ8NFY4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 AC069152.1-201ENST00000438030 544 ntBASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 CNN2P6-201ENST00000439038 900 ntBASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SEMA6DQ8NFY4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA6DQ8NFY4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms