Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 AC023632.3-201ENST00000521633 145 ntBASIC17.44■□□□□ 0.38
CPEB3Q8NE35 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 AL031963.3-201ENST00000606441 850 ntBASIC17.44■□□□□ 0.38
CPEB3Q8NE35 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 KRT8P20-201ENST00000423953 1409 ntBASIC17.44■□□□□ 0.38
CPEB3Q8NE35 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 BX119927.1-201ENST00000636596 1552 ntBASIC17.44■□□□□ 0.38
CPEB3Q8NE35 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPEB3Q8NE35 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CPEB3Q8NE35 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 HLA-G-202ENST00000376815 851 ntBASIC17.41■□□□□ 0.38
CPEB3Q8NE35 HLA-G-203ENST00000376818 1127 ntBASIC17.41■□□□□ 0.38
CPEB3Q8NE35 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.41■□□□□ 0.38
CPEB3Q8NE35 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 AL691432.2-201ENST00000607222 2038 ntBASIC17.4■□□□□ 0.38
CPEB3Q8NE35 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPEB3Q8NE35 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms