Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 AL355802.2-201ENST00000402069 882 ntBASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 AC091874.3-201ENST00000512672 1195 ntBASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SIMC1Q8NDZ2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 AC142086.2-201ENST00000569753 217 ntBASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIMC1Q8NDZ2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 MYC-209ENST00000641252 345 ntBASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 AL691432.2-201ENST00000607222 2038 ntBASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIMC1Q8NDZ2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 MIR4758-201ENST00000577688 71 ntBASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 AC083880.1-201ENST00000608266 535 ntBASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIMC1Q8NDZ2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIMC1Q8NDZ2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms