Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 MYC-208ENST00000641036 567 ntBASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC31.4■■■□□ 2.62
CFAP43Q8NDM7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 NIFKP9-201ENST00000419265 221 ntBASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP43Q8NDM7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.61
CFAP43Q8NDM7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC31.39■■■□□ 2.61
CFAP43Q8NDM7 AC010203.1-204ENST00000548782 407 ntBASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 NMU-205ENST00000511469 756 ntTSL 3 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP43Q8NDM7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP43Q8NDM7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 AL121894.2-201ENST00000602977 491 ntBASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP43Q8NDM7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 KRT16P1-201ENST00000399124 1418 ntBASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 BID-203ENST00000399765 1879 ntTSL 2 BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 UPK3BP1-201ENST00000428678 509 ntBASIC31.35■■■□□ 2.61
CFAP43Q8NDM7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC31.34■■■□□ 2.61
CFAP43Q8NDM7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC31.33■■■□□ 2.61
CFAP43Q8NDM7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CFAP43Q8NDM7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 AP002982.1-201ENST00000492365 877 ntBASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms