Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.59■■□□□ 1.21
RETREG2Q8NC44 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG2Q8NC44 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 BX088651.1-201ENST00000540551 451 ntBASIC22.58■■□□□ 1.21
RETREG2Q8NC44 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG2Q8NC44 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.58■■□□□ 1.2
RETREG2Q8NC44 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RETREG2Q8NC44 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
RETREG2Q8NC44 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.58■■□□□ 1.2
RETREG2Q8NC44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 AC239809.2-201ENST00000415381 517 ntBASIC22.57■■□□□ 1.2
RETREG2Q8NC44 AC133681.1-201ENST00000465482 601 ntBASIC22.57■■□□□ 1.2
RETREG2Q8NC44 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 AC124016.1-201ENST00000609552 612 ntBASIC22.57■■□□□ 1.2
RETREG2Q8NC44 AC120498.8-201ENST00000614275 531 ntBASIC22.57■■□□□ 1.2
RETREG2Q8NC44 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 AC027702.1-201ENST00000563810 1770 ntBASIC22.57■■□□□ 1.2
RETREG2Q8NC44 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.57■■□□□ 1.2
RETREG2Q8NC44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 TSPY7P-201ENST00000431358 1114 ntBASIC22.56■■□□□ 1.2
RETREG2Q8NC44 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 AC020907.5-201ENST00000624372 1936 ntBASIC22.56■■□□□ 1.2
RETREG2Q8NC44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 AL135905.2-201ENST00000584934 1404 ntBASIC22.56■■□□□ 1.2
RETREG2Q8NC44 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.56■■□□□ 1.2
RETREG2Q8NC44 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 AC110285.5-201ENST00000611501 352 ntBASIC22.55■■□□□ 1.2
RETREG2Q8NC44 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.55■■□□□ 1.2
RETREG2Q8NC44 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms