Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C9orf40Q8IXQ3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.44■□□□□ 0.54
C9orf40Q8IXQ3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.44■□□□□ 0.54
C9orf40Q8IXQ3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C9orf40Q8IXQ3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C9orf40Q8IXQ3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 AC098590.1-201ENST00000468126 897 ntBASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 MTDHP1-201ENST00000605323 784 ntBASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 AL121906.2-201ENST00000621597 723 ntBASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
C9orf40Q8IXQ3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 RN7SL471P-201ENST00000580476 299 ntBASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 AL121829.2-201ENST00000620908 328 ntBASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C9orf40Q8IXQ3 AL691432.2-201ENST00000607222 2038 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms