Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCUBE3Q8IX30 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 UNC93B4-201ENST00000505679 747 ntBASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 AC093827.2-201ENST00000512654 315 ntBASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCUBE3Q8IX30 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 KRT16P6-202ENST00000425692 1426 ntBASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 MIR4651-201ENST00000582622 73 ntBASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 AC008403.3-201ENST00000598924 454 ntBASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCUBE3Q8IX30 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.96■□□□□ 0.95
SCUBE3Q8IX30 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
SCUBE3Q8IX30 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 FAM201B-201ENST00000458407 597 ntBASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 AC120498.8-201ENST00000614275 531 ntBASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.95■□□□□ 0.94
SCUBE3Q8IX30 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms